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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915590.1_cds_XP_016465389.1_58346
CDS Infomation

[gene=LOC107788228] [db_xref=GeneID:107788228] [protein=multisubstrate pseudouridine synthase 7-like] [protein_id=XP_016465389.1] [location=join(58513..58733,59459..59540,59623..59820,59914..60128,74698..74770,75025..75081,76333..76412,76508..76570,76741..76828,77479..77581,77750..77853,78255..78328,79178..79242,79362..79534,80587..80654,80735..80795,81595..81632,83941..84009,84552..84900,85058..85087)] [gbkey=CDS]
Sequence

ATGCTAAAAACCCTTTGTTCCAAACTCCGGAGTCATCAGCAGCTACTAACAAAAACCCTG
CAACAAGTTCTTGGTCACCCTAAAATTCTAAAACATTACAACAGCTTTTTTGATCAGAGT
CTTTTGCCTGCTACTATGATGAAAACTATGGATGAATCCGATGTGGGCATCTCCTGCTAC
ATTTCCAAGCTCCCTGGCTTTCGTGGCATACTCAAACAAAGGTACTCCGACTTCATTGTA
AATGAAGTGGATTTAGATGGAAATGTTGTTCATTTGACTTCATTGGAGGCTCCAGCGGAG
GTGTGTTCAGAGGACAAGGACGTAAATATATCTGATCAACTGAACAAAAGTTATGTGACT
GAGATAGAATCTTTCAGATCTCTCGCTGGCAATTCTGATGCTGACAAGCTTAAGGGTCTT
ATTGATAAACTTAATTCTGGAGTCGATGTCAGTGATGAATCCGTCGTCCTTTCACCAAGT
TCAGATAAATTGCATCGTACTGCAATTCATAATTTTTTCAAGGAAAGATTAAAATTCCTT
GTAACAGATGCTGTTGATGGACCGGAGGACTCATCAAAGTGTGTTCGTGTGAGATTGAAT
AAGGGAGGGAATAATGGAAGGGGTAGATTCTCTAGGAAAAGGAAAGACCGAAATGATAAA
CCTTATGACAGTAGAGGTTCAGACAGTTGGCCAGAACATCTTGGCAAGTTCCTTAGGTTT
CATCTTTTCAAGGAGAACAAGGATACACAGGAAGCTTTAAACGTTATAGCAAAGATGCTC
GGCGTTCAGCCTAGGTCCTTTGGATTTGCTGGTACTAAAGACAAGCGTGCTGTATCAACC
CAGAGGGTTACTGTTTTCAAGCAACGAGCAAGTAGAGTAGCAGCTCTCAACGAAAGATTG
ATTGGAATCAAAGTTGGTGACTTTTGCCATGTTAAAGAAGGGCTTCTGCTTGGGCAGCTT
TATGGGAACCGATTTACTATAACACTTCGGGGAGTGTCAGCAGATTCTGAGGATATAATT
AAAGCATCAGCAGTTGCCCTAGGAGAGCTTGGATTTATAAACTATTTTGGTTTACAGCGG
TTTGGCAGCAGTTCTGTGCCAACCCATCTAATTGGAGCTGCGTTATTGCGTGGAGAGTGG
AAAGCTGCTGTCAGCTTGATTCTTGATCCAAGAGAAGGGGAGAAGAATGCCATCAGTACA
GTGAGGGAGTATTACAAGGAAAGTGGTGACATTGATGGGACTCTAAGGCAGTTACCTCGA
CATCTGGTTGCTGAAAGGGCGATTTTGCAGTGCCTGAAAAAATCTCCTGGAAACTGTCTA
CAAGCTCTGAAGGGGATACCAAGGACTCTCCGAATGATGTATGTACATAGCTATCAAAGT
TATCTTTGGAACCATGCAGCAAGCATGAGAGTGCAAAAGCATGGGTTTGACCAAGTTGTG
TTGGGAGATCTGGTTTATTCAAAGGAACAACCTAAAGAGAGAGAAACTTTTGTTGCTGAA
TGTGAAGACGTGAATGGCAACAACATGGATGATTATAGTAATCTGGATGAGACCTCAGAG
ACTGATCTTCCTGAAGAAAAAAATATATCAGTCAAGGCTATAAATGAAGAAGACCTTATA
TCCGGTACATATACCATCGAAGATGTACTTCTACCTTTGCCTGGGTCTAGAGTTATTTAT
CCATCAAATGACATTGGGGAAGTTTACTGTGACTTGGCACAGAAGGATGGTATCAGCTTG
ACAGAGACTGCGCATAAGATCAAGGAATTCTCCATAACTAATATGACCGGAGCTTACAGA
CGTGTGTTTCAAAAGCCGAAGGATTTTGAATGGGAATTGCTTAGTTACACTGATGGAACT
ATACCTCTAGCTGAGACAGATTTTGATGTCATTGCCAAGTCAGTAAAGAAAAGCAAGGCC
AGAGAGGATAACTCAGCCAATGGAAGCGAGGAACTTCCTGCTGACTATGGTACATCTTCA
GCAACCTTTGAAGGTGGTGACATGCTTCCAGGAAAAAGTCGTGAGGAAAAGATTAACAGT
GAAGCGAGAATGCAATCAGAGGAATCTCAGAGTGGTGGTAATGCTCAGGAGAGCCAGATG
GCTCTCAAGCTGAGCTTTACACTACCAGCTTCTTGCTATGCAACTATGGCCGTGAGGGAG
CTGCTGAAAACGTCCACTTCTGTTGCATTTCACAAGTCTCTAAATGAATAA

Peptide Sequence

PEP ID

XP_016465389.1
PEP Infomation

PREDICTED: multisubstrate pseudouridine synthase 7-like [Nicotiana tabacum]
Sequence

MLKTLCSKLRSHQQLLTKTLQQVLGHPKILKHYNSFFDQSLLPATMMKTMDESDVGISCY
ISKLPGFRGILKQRYSDFIVNEVDLDGNVVHLTSLEAPAEVCSEDKDVNISDQLNKSYVT
EIESFRSLAGNSDADKLKGLIDKLNSGVDVSDESVVLSPSSDKLHRTAIHNFFKERLKFL
VTDAVDGPEDSSKCVRVRLNKGGNNGRGRFSRKRKDRNDKPYDSRGSDSWPEHLGKFLRF
HLFKENKDTQEALNVIAKMLGVQPRSFGFAGTKDKRAVSTQRVTVFKQRASRVAALNERL
IGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSADSEDIIKASAVALGELGFINYFGLQR
FGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPR
HLVAERAILQCLKKSPGNCLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVV
LGDLVYSKEQPKERETFVAECEDVNGNNMDDYSNLDETSETDLPEEKNISVKAINEEDLI
SGTYTIEDVLLPLPGSRVIYPSNDIGEVYCDLAQKDGISLTETAHKIKEFSITNMTGAYR
RVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVKKSKAREDNSANGSEELPADYGTSS
ATFEGGDMLPGKSREEKINSEARMQSEESQSGGNAQESQMALKLSFTLPASCYATMAVRE
LLKTSTSVAFHKSLNE

Transcript Sequence

Gene sequence data has not been registered.